2025
Boots on the ground 2: AI-driven tools for maximizing soybean yield and profitability
Category:
Sustainable Production
Keywords:
Field management Nutrient managementSoil healthTillageYield trials
Lead Principal Investigator:
Shawn Conley, University of Wisconsin
Co-Principal Investigators:
Joe McClure, Iowa Soybean Association
Maninder Singh, Michigan State University
Lindsay Malone, North Dakota State University
Paul Esker, Pennsylvania State University
Christian Krupke, Purdue University
Laura Lindsey, The Ohio State University
Nick Seiter, University of Illinois at Urbana-Champaign
Nicolas Cafaro La Menza, University of Nebraska at Lincoln
+7 More
Project Code:
60060
Contributing Organization (Checkoff):
Institution Funded:
Brief Project Summary:
The holy grail of agronomic research is identifying and adopting the optimum cropping system at the field scale. This system should result in field-specific maximum yield potential and increased farm profitability and sustainability. Soybean farmers would greatly value a tool that recommends high-yield and profitable soybean management practices at the field level.
Another major challenge is predicting where abiotic and biotic stressors will be present within a field. Currently, there is no rapid method for evaluating the presence and distribution of these yield-limiting factors across entire fields; thus, intensive in-season scouting is needed. A tool that guides users on where to scout across a large field would be highly valuable to soybean farmers.
Furthermore, farming generates massive amounts of data every year. A user-friendly platform for in-field crop scouting and data collection, including information on crop production practices at the farm and field scale, can help farmers collect, organize, and store their data. Data stored in an organized format can allow for subsequent analysis and the generation of insights that can improve farm profitability.
In this project, we
Unique Keywords:
#agronomy, #ai, #crop management systems, #modeling, #on-farm, #pest management, #scouting, #yield
Information And Results
Project Summary

Test Agroptimizer across the NC Region: A significant challenge in identifying and adopting the optimum cropping system at the field scale is that multiple factors (more than we can evaluate simultaneously in replicated trials) interact and affect yield. Therefore, the management practices that result in the greatest yield can and will vary among different fields, even within the same region.
An important issue with current research approaches is that the highly variable and farm-specific management costs (e.g., different farmers often pay different prices for similar seeds) should be considered. Therefore, the effect of a management practice (e.g., seeding rate) on yield is disconnected from its associated cost (e.g., $/seed bag). Although this does not negatively affect the recommended rate for optimum yield, it makes profit optimization at the farm level challenging. Consequently, input overapplication, or simply input application when there is no need, can suppress farmer profit. Therefore, results from traditional replicated field trials cannot be used to thoroughly recommend actionable knowledge at the field level since they cannot account for all sources of variability and uncertainty.
Given all the well-known deficiencies of current agricultural research methods, a new machine learning cloud-based decision support tool (Agroptimizer, www.agroptimizer.com) was developed to identify optimum corn and soybean cropping systems for maximum yield and profitability from among thousands of possible cropping systems a farmer can choose from in a single field. Agroptimizer estimates yield by accounting for field location, soil type, weather conditions, and several management practices and uses a combination of methods to evaluate all possible management combinations. Then, the most profitable cropping system is identified by utilizing the estimated yield and production costs specific to each field. Eventually, the cropping systems with the highest probability of success are recommended to the farmer. The spatial coverage of the Agroptimizer is extensive and includes the entire NC soybean production region.
In a recent study, Agroptimizer recommendations were compared against cropping systems generated by University of Wisconsin researchers (experts) across Wisconsin between 2021 and 2023 (Mourtzinis and Conley, 2024). Agroptimizer recommendations increased soybean yield and yielded similar profit compared to experts’ recommendations. Overall, the results showed that Agroptimizer recommendations were similar to those of local experts and identified cropping systems that resulted in high yield and profit.
To date, no other decision-support tools, public or private, are available to US farmers seeking optimal cropping systems (a combination of multiple management practices) at the field level. Evaluating such tools under field conditions involving unexpected and unmanageable yield adversities across a range of growing conditions is important for determining their effectiveness in helping US farmers increase yield and profit across major agricultural regions.

Validate a satellite-assisted field scouting alert system and a digital crop defoliation tool to integrate into the OCM. Even with an extensive field history, it is still difficult to predict where abiotic and biotic stressors will be present within a field due to uncertainty about the anticipated pest-related yield pressure during the growing season and weather conditions. Additionally, there is no rapid method to evaluate the presence and distribution of these yield-limiting factors across entire fields; thus, intensive in-season scouting is needed. Unfortunately, the agricultural workforce trained in scouting is depleted. As a result, many farmers apply inputs prophylactically across the entire field, which, in the absence of pest pressure, results in a negative return on investment, potentially increases pest resistance, and decreases long-term sustainability (i.e., pesticide tools don’t work as well when truly needed). A tool that guides users on where to scout across a large field would be highly valuable to soybean farmers.
As part of the Data-Driven project, we developed a new tool that uses Sentinel-2 satellite images and automatically extracts the Normalized Vegetation Difference Index (NDVI) for every 60 x 60 ft section in a field. We hypothesize that this information can guide precision scouting efforts throughout the growing season. Field areas with low NDVI values may be associated with yield-limiting factors (e.g., pest pressure, weeds, etc.) and should be scouted.

Open Crop Manager (OCM):We have also developed Open Crop Manager (OCM), a cloud-based management decision support tool, with the support of our Data-Driven project. We leveraged this investment with internal and federal funding support to help add additional layers to the platform and begin planning for new tools. The OCM provides a user-friendly platform for in-field crop scouting and data collection, including information on crop production practices at the farm and field scale. The OCM enables data collection from scouting reports for 32 pests, 37 diseases, 48 weeds, and 28 abiotic issues. This intensive scouting method was tested in 2022 and 2023 across ten states, generating 3,695 observations in its first year of application (Cucak et al., 2022) and 4,195 in its second year (unpublished data). Field-scale scouting also resulted in the collection of 7,743 images.
The OCM protects data privacy by requiring user authorization, utilizing data perturbation methods, and generalizing results. Access to a field’s data can be controlled by allowing growers to determine individual collaborators’ level of access to that data. Users of OCM are also made aware of our data privacy policies and their data privacy rights with access-appropriate privacy notices/waivers.
The OCM platform was developed to continuously add new applications. In this funding cycle, we will add a digital crop defoliation tool that uses existing, open-source leaf defoliation estimators (e.g., Leafbyte) to rapidly assess the level of herbivory and return an estimate of whether the sampled leaves are at or approaching an action threshold (i.e., “red light = treat, yellow light = re-sample within a week, green light = well below threshold”). These thresholds are soybean growth stage-specific; some have been in place for decades. They were recently re-evaluated in a multi-state NCSRP-funded objective led by co-PI Nick Seiter, which revealed that the pest complex contributing to soybean herbivory rarely exceeds these thresholds in the North Central region. The integration of this defoliation estimator into the OCM platform would provide a quick, easy, and repeatable way to confirm whether intervention for defoliating insects is necessary – adding a new dimension to its ability to assist in scouting and decision-making.

Project Objectives

Farmers face uncertainty about management practices that can increase yield and profit, as well as pest management practices that can protect yield when and where needed in the field. This proposal will attempt to address these issues across the NC-US region. The proposed approach is an opportunity for U.S. soybean farmers to increase profitability because the tools to be tested have already been developed with promising results in regional evaluations and can have an immediate impact as early as the following growing season. Similar tools to assist farmers across the NC region do not exist.

Project Deliverables

By the end of this 3-year project, we will have validated the effectiveness of a novel machine-learning cloud-based decision support tool to identify management practices that can increase yield and profit across the NC region. Additionally, we will have validated the effectiveness of a satellite-assisted scouting and defoliation assessment tool to detect yield-limiting factors in each field across the NC region during the growing season. We will also strengthen state-to-state research collaboration through the managed coordination of the on-farm network and leverage existing NCSRP funding to secure national funding opportunities. Overall, the potential impact of the outcomes derived from this study is significant and attainable for the entire NCSRP growing region.

Progress Of Work

Updated April 14, 2025:
We have determined the major objectives, output publications, and logistics for the 2025 growth season of this project. We will use our decision support tool, Agroptimizer, and our data platform, Open Crop Manager (OCM) to 1) evaluate Agroptimizer recommendations across the North Central US, 2) examine the use of satellite imagery to detect stressors, and 3) test a defoliation tool and recommendations.

Our first objective is to evaluate Agroptimizer recommendations in a minimum of five fields per participating state. Recruiting farmers to participate is an ongoing task. State collaborators (OH, MI, IA, NE, ND, MO, IN, IL, PA and WI) have been actively recruiting farmers to conduct the trials and we are finalizing the site specific treatments to be tested in 2025.

The second objective is to test a script that allows for real-time monitoring of fields with satellite images to detect areas potentially linked with low yield. Low normalized vegetative index (NDVI) values are associated with reduced chlorophyl content and therefore reduced productivity. We will use this well-established relationship to detect potentially problematic areas within each field. Growers will be notified every 7-10 days, or whenever the next cloud-free image will be available. The script will be tested at different NDVI thresholds on the five observed fields in each participating state.

Our third objective is to add a defoliation assessment tool to the Open Crop Manager (OCM) platform. Open-source leaf defoliation estimators (e.g., Leafbyte) will be used to rapidly assess the level of herbivory and determine whether the sampled leaves are at or approaching an action threshold (i.e. “red = treat, yellow = re-sample within a week, green = well below threshold”). These thresholds were recently reevaluated in a multi-state NCSRP funded objective led by co-PI Nick Seiter. This reevaluation revealed that soybean herbivory rarely exceeds these thresholds in the North Central region. These thresholds are soybean growth stage-specific, and some have been in place for decades. The integration of this defoliation estimator to the OCM platform will provide a quick, easy, and repeatable way to confirm whether intervention for defoliating insects is necessary, adding a new dimension to the platform’s ability to assist in scouting and decision making.

Project PIs Dr. Shawn Conley (WI) and Dr. Paul Esker (PA), along with Dr. Santosh Sanjel (PA), Miranda DePriest (PA), Tatiane Severo Silva (WI), John Gaska (WI), and Dr. Spyridon Mourtzinis (WI), will supervise data collection and will be responsible for quality control of the data and analysis. The WI-PA core team holds bi-monthly virtual meetings to discuss and monitor project progress.

We will use the data generated to write the following publications:
- Evaluating Agroptimizer decision support tool recommendations across the North Central US (starting in year 2)
- Improving the efficiency of field scouting using in-season remote sensing (In progress)
- Assessing the effectiveness of remote sensing data to identify soybean yield stressors (In progress)

By the end of this 3-year project we will have validated the efficacy of a novel machine learning cloud-based decision support tool to identify management practices that can increase yield and profit across the North Central region. Additionally, we will have determined the efficacy of a satellite-assisted scouting tool and a defoliation assessment tool to detect yield-limiting factors across the North Central US during the growing season. Both tools will have the potential to help farmers across the North Central region to protect and increase yield, profit, and sustainability in their fields. We expect that combined use of these tools can substantially increase farm profitability by 1) identifying best management practices, and 2) by applying pesticides when and where needed through precision scouting. It is important to note that upon successful validation, these tools can have an immediate impact in farming operations from the following growing season since they are already developed. We will also strengthen state-to-state research collaboration through the managed coordination of the on-farm network as well as leverage existing NCSRP funding to secure national funding opportunities. To this point OCM has logged the following date: total scouting reports: 10,039; Total images: 10,069; Total production surveys: ~900; Total users: 102 data from the following participating states (just counting scouting reports and images): 12, including PA, IL, IA, IN, KA, MI, MN, NE, NY, ND, OH, WI. Overall, the potential impact of the outcomes derived from this study are significant and attainable for the entire NCSRP growing region.

Final Project Results

Benefit To Soybean Farmers

The tools we will test have the potential to help farmers across the NC region protect and increase yield, profit, and sustainability in their fields. We expect the combined use of these tools to substantially increase farm profitability by identifying field specific best management practices and applying pesticides when and where needed through precision scouting. It is important to note that these tools, upon successful validation, can immediately impact farming operations since they are already developed. The network platform also has the capacity to grow and integrate new tools and crops.

The United Soybean Research Retention policy will display final reports with the project once completed but working files will be purged after three years. And financial information after seven years. All pertinent information is in the final report or if you want more information, please contact the project lead at your state soybean organization or principal investigator listed on the project.